Java editor for biological pathways

Elmar Trost, Hubert Hackl, Michael Maurer, Zlatko Trajanoski

    Research output: Contribution to journalArticle

    Abstract

    Summary: A visual Java-based tool for drawing and annotating biological pathways was developed. This tool integrates the possibilities of charting elements with different attributes (size, color, labels), drawing connections between elements in distinct characteristics (color, structure, width, arrows), as well as adding links to molecular biology databases, promoter sequences, information on the function of the genes or gene products, and references. It is easy to use and system independent. The result of the editing process is a PNG (portable network graphics) file for the images and XML (extended markup language) file for the appropriate links.
    Original languageEnglish
    Pages (from-to)786-787
    JournalBioinformatics
    Volume19
    Issue number6
    DOIs
    Publication statusPublished - 2003

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