Complete genome sequence of Pseudomonas corrugata strain RM1-1-4, a stress protecting agent from the rhizosphere of an oilseed rape bait plant

Christin Zachow, Henry Müller, Christina M. Laireiter, Ralf Tilcher, Gabriele Berg

Research output: Contribution to journalArticleResearchpeer-review

Abstract

Pseudomonas corrugatastrain RM1-1-4 is a rhizosphere colonizer of oilseed rape. A previous study has shown that this motile, Gram-negative, non-sporulating bacterium is an effective stress protecting and biocontrol agent, which protects their hosts against abiotic and biotic stresses. Here, we announce and describe the complete genome sequence of P. corrugata RM1-1-4 consisting of a single 6.1 Mb circular chromosome that encodes 5189 protein coding genes and 85 RNA-only encoding genes. Genome analysis revealed genes predicting functions such as detoxifying mechanisms, stress inhibitors, exoproteases, lipoproteins or volatile components as well as rhizobactin siderophores and spermidine. Further analysis of its genome will help to identify traits promising for stress protection, biocontrol and plant growth promotion properties.

Original languageEnglish
Article number66
JournalStandards in Genomic Sciences
Volume12
Issue number1
DOIs
Publication statusPublished - 9 Nov 2017

Fingerprint

Rhizosphere
Pseudomonas
Genome
Exopeptidases
Siderophores
Spermidine
Genes
Lipoproteins
Chromosomes
RNA
Bacteria
Growth
Proteins

Keywords

  • Biocontrol
  • Detoxification systems
  • Plant growth promotion
  • Pseudomonas corrugata
  • Rhizosphere of bait plant
  • Sphagnum magellanicum-treated seeds
  • Stress protection

ASJC Scopus subject areas

  • Genetics

Cite this

Complete genome sequence of Pseudomonas corrugata strain RM1-1-4, a stress protecting agent from the rhizosphere of an oilseed rape bait plant. / Zachow, Christin; Müller, Henry; Laireiter, Christina M.; Tilcher, Ralf; Berg, Gabriele.

In: Standards in Genomic Sciences, Vol. 12, No. 1, 66, 09.11.2017.

Research output: Contribution to journalArticleResearchpeer-review

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