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Martina Köberl

Dr.rer.nat., MSc

20092021
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Research Output 2010 2019

2019

Deciphering the microbiome shift during fermentation of medicinal plants

Köberl, M., Erschen, S., Etemadi, M., White, R. A. III., El-Arabi, T. F. & Berg, G., 17 Sep 2019, In : Scientific reports. 9, 1, 11 p., 13461.

Research output: Contribution to journalArticleResearchpeer-review

Open Access
lactic acid bacteria
medicinal plants
fermentation
Calendula officinalis
Matricaria chamomilla
2018

The banana microbiome: stability and potential health indicators

Köberl, M., Dita, M., Nimusiima, J., Tumuhairwe, J. B., Kubiriba, J., Staver, C. & Berg, G., 31 Mar 2018, In : Acta horticulturae. 1196, p. 1-8

Research output: Contribution to journalArticleResearchpeer-review

2017

From data to knowledge: the future of multi-omics data analysis for the rhizosphere

White, R. A. III., Borkum, M. I., Rivas-Ubach, A., Bilbao, A., Wendler, J. P., Colby, S. M., Köberl, M. & Jansson, C., Jun 2017, In : Rhizosphere. 3, 2, p. 222-229

Research output: Contribution to journalArticleResearchpeer-review

Members of Gammaproteobacteria as indicator species of healthy banana plants on Fusarium wilt-infested fields in Central America

Köberl, M., Dita, M., Martinuz, A., Staver, C. & Berg, G., 27 Mar 2017, In : Scientific reports. 7, 45318.

Research output: Contribution to journalArticleResearchpeer-review

Plant microbial diversity is suggested as the key to future biocontrol and health trends

Berg, G., Köberl, M., Rybakova, D., Müller, H., Grosch, R. & Smalla, K., 1 May 2017, In : FEMS microbiology ecology. 93, 5, fix050.

Research output: Contribution to journalArticleResearchpeer-review

The state of rhizospheric science in the era of multi-omics: a practical guide to omics technologies

White, R. A. III., Rivas-Ubach, A., Borkum, M. I., Köberl, M., Bilbao, A., Colby, S. M., Hoyt, D. W., Bingol, K., Kim, Y-M., Wendler, J. P., Hixson, K. K. & Jansson, C., Jun 2017, In : Rhizosphere. 3, 2, p. 212-221

Research output: Contribution to journalArticleResearchpeer-review

2016

Comparisons of diazotrophic communities in native and agricultural desert ecosystems reveal plants as important drivers in diversity

Köberl, M., Erlacher, A., Ramadan, E. M., El-Arabi, T. F., Müller, H., Bragina, A. & Berg, G., Feb 2016, In : FEMS microbiology ecology. 92, 2, fiv166.

Research output: Contribution to journalArticleResearchpeer-review

Endophytes-assisted biocontrol: novel insights in ecology and the mode of action of Paenibacillus

Rybakova, D., Cernava, T., Köberl, M., Liebminger, S., Etemadi Shalamzari, M. & Berg, G., Aug 2016, In : Plant and soil. 405, 1, p. 125-140

Research output: Contribution to journalArticleResearchpeer-review

Linking the microbiome to plant metabotype and high-value phytochemicals

Köberl, M., White, R. A. III., Rivas-Ubach, A., Schmidt, R., El-Arabi, T. F., Bauer, R., Jansson, J. K., Jansson, C. & Berg, G., 14 Dec 2016.

Research output: Contribution to conferencePosterResearch

The banana microbiome: stability and potential health indicators

Köberl, M., Dita, M., Nimusiima, J., Tumuhairwe, J. B., Kubiriba, J., Staver, C. & Berg, G., 10 Oct 2016.

Research output: Contribution to conference(Old data) Lecture or PresentationResearch

The plant microbiome explored: implications for experimental botany

Berg, G., Rybakova, D., Grube, M. & Köberl, M., Feb 2016, In : Journal of experimental botany. 67, 4, p. 995-1002

Research output: Contribution to journalArticleResearchpeer-review

2015

Agroforestry leads to shifts within the gammaproteobacterial microbiome of banana plants cultivated in Central America

Köberl, M., Dita, M., Martinuz, A., Staver, C. & Berg, G., 11 Feb 2015, In : Frontiers in Microbiology . 6, 91.

Research output: Contribution to journalArticleResearchpeer-review

Complete genome sequence of Bacillus amyloliquefaciens strain Co1-6, a plant growth-promoting rhizobacterium of Calendula officinalis

Köberl, M., White, R. A. III., Erschen, S., Spanberger, N., El-Arabi, T. F., Jansson, J. K. & Berg, G., 13 Aug 2015, In : Genome Announcements. 3, 4, e00862-15.

Research output: Contribution to journalArticleResearch

Draft genome sequence of Paenibacillus polymyxa strain Mc5Re-14, an antagonistic root endophyte of Matricaria chamomilla

Köberl, M., White, R. A. III., Erschen, S., El-Arabi, T. F., Jansson, J. K. & Berg, G., 6 Aug 2015, In : Genome Announcements. 3, 4, e00861-15.

Research output: Contribution to journalArticleResearch

Draft genome sequence of Streptomyces sp. strain Wb2n-11, a desert isolate with broad-spectrum antagonism against soilborne phytopathogens

Köberl, M., White, R. A. III., Erschen, S., El-Arabi, T. F., Jansson, J. K. & Berg, G., 6 Aug 2015, In : Genome Announcements. 3, 4, e00860-15.

Research output: Contribution to journalArticleResearch

Linking the microbiome to plant metabotype and high-value phytochemicals

Köberl, M., White, R. A. III., Schmidt, R., El-Arabi, T. F., Bauer, R., Jansson, J. K., Jansson, C. & Berg, G., 14 Sep 2015.

Research output: Contribution to conferencePosterResearch

Protecting national economic crops via application of beneficial microorganisms to bio-control plant and human pathogens in organic agriculture – BioGuard

Köberl, M., Erschen, S., Etemadi Shalamzari, M. & Berg, G., 12 Nov 2015.

Research output: Contribution to conference(Old data) Lecture or PresentationResearch

The microbiome of medicinal plants: diversity and importance for plant growth, quality and health

Köberl, M., Schmidt, R., Ramadan, E. M., Smalla, K., Bauer, R. & Berg, G., 11 Jan 2015.

Research output: Contribution to conference(Old data) Lecture or PresentationResearch

Transgenic banana plants expressing Xanthomonas wilt resistance genes revealed a stable non-target bacterial colonization structure

Nimusiima, J., Köberl, M., Tumuhairwe, J. B., Kubiriba, J., Staver, C. & Berg, G., 10 Dec 2015, In : Scientific reports. 5, 18078.

Research output: Contribution to journalArticleResearchpeer-review

2014

Effects of bacterial inoculants on the indigenous microbiome and secondary metabolites of chamomile plants

Schmidt, R., Köberl, M., Mostafa, A., Ramadan, E. M., Monschein, M., Jensen, K. B., Bauer, R. & Berg, G., 19 Feb 2014, In : Frontiers in Microbiology . 5, 64.

Research output: Contribution to journalArticleResearchpeer-review

Impact of agroforestry and Fusarium wilt incidence on the gammaproteobacterial microbiome of bananas from orchards in Central America

Köberl, M., Martinuz, A., Dita, M., Staver, C. & Berg, G., 15 Sep 2014.

Research output: Contribution to conference(Old data) Lecture or PresentationResearch

Indigenous PGPR and below-ground microbial communities of an organically managed desert agro-ecosystem

Köberl, M., Schmidt, R., Ramadan, E. M., Müller, H., Smalla, K. & Berg, G., 2014, Recent advances in biofertilizers and biofungicides (PGPR) for sustainable agriculture. Newcastle upon Tyne, United Kingdom: Cambridge Scholars Publishing, p. 206-214

Research output: Chapter in Book/Report/Conference proceedingConference contributionResearch

Microbial communities of medicinal plants: diversity and importance for plant growth, quality and health

Köberl, M., Schmidt, R., Ramadan, E. M., Smalla, K., Bauer, R. & Berg, G., 6 May 2014.

Research output: Contribution to conference(Old data) Lecture or PresentationResearch

The microbiome of medicinal plants: diversity and importance for plant growth, quality and health

Köberl, M., Schmidt, R., Ramadan, E. M. & Berg, G., 17 Nov 2014.

Research output: Contribution to conferencePosterResearch

The microbiome of medicinal plants: diversity and importance for plant growth, quality and health

Köberl, M., Schmidt, R., Ramadan, E. M., Smalla, K., Bauer, R. & Berg, G., 23 Oct 2014.

Research output: Contribution to conference(Old data) Lecture or PresentationResearch

The microbiome of medicinal plants: diversity and importance for plant growth, quality and health

Köberl, M., Schmidt, R., Ramadan, E. M., Smalla, K., Bauer, R. & Berg, G., 26 Oct 2014.

Research output: Contribution to conferencePosterResearch

2013

Bacillus and Streptomyces were selected as broad-spectrum antagonists against soilborne pathogens from arid areas in Egypt

Köberl, M., Ramadan, E. M., Adam, M., Cardinale, M., Hallmann, J., Heuer, H., Smalla, K. & Berg, G., May 2013, In : FEMS microbiology letters. 342, 2, p. 168-178

Research output: Contribution to journalArticleResearchpeer-review

Biocontrol strategies and next generation sequencing: organic desert agriculture in Egypt

Köberl, M., Schmidt, R., Ramadan, E. M., Bragina, A., Müller, H. & Berg, G., 2013, Genomics I – humans, animals and plants. 1 ed. Hong Kong, China: iConcept Press Ltd., Vol. I. p. 317-336 (Genomics).

Research output: Chapter in Book/Report/Conference proceedingChapterResearchpeer-review

Indigenous PGPR and below-ground microbial communities of an organically managed desert agro-ecosystem

Köberl, M., Schmidt, R., Ramadan, E. M., Cardinale, M., Müller, H., Smalla, K. & Berg, G., 21 Apr 2013.

Research output: Contribution to conference(Old data) Lecture or PresentationResearch

Next-generation bio-products: technology-based improvement of biopesticides and biologicals

Berg, G., Köberl, M. & Müller, H., 15 Dec 2013.

Research output: Contribution to conference(Old data) Lecture or PresentationResearch

The microbiome of medicinal plants: diversity and importance for plant growth, quality and health

Köberl, M., Schmidt, R., Ramadan, E. M., Bauer, R. & Berg, G., 20 Dec 2013, In : Frontiers in Microbiology . 4, 400.

Research output: Contribution to journalArticleResearchpeer-review

The microbiome of medicinal plants: investigated in an organically managed desert agro-ecosystem

Köberl, M., Ramadan, E. M., Müller, H., Bragina, A., Smalla, K. & Berg, G., 14 Jun 2013.

Research output: Contribution to conference(Old data) Lecture or PresentationResearch

The microbiome of medicinal plants and its potential for biocontrol and promotion of plant growth and quality

Köberl, M., Schmidt, R., Ramadan, E. M., Müller, H., Bragina, A., Smalla, K. & Berg, G., 11 Dec 2013.

Research output: Contribution to conferencePosterResearch

2012

A biocontrol strategy for sustainable agriculture in desert ecosystems

Köberl, M., Müller, H., Ramadan, E. M., Smalla, K. & Berg, G., 21 Jun 2012.

Research output: Contribution to conference(Old data) Lecture or PresentationResearch

A biocontrol strategy for sustainable agriculture in desert ecosystems

Köberl, M., Müller, H., Ramadan, E. M., Roßmann, B., Staver, C., Fürnkranz, M., Lukesch, B., Grube, M. & Berg, G., 3 May 2012.

Research output: Contribution to conference(Old data) Lecture or PresentationResearch

Biological control agents for combating soil-borne pathogens in Egypt

Köberl, M., Zachow, C., Müller, H., Ramadan, E. M., Bauer, R. & Berg, G., 2012, In : IOBC/WPRS Bulletin. 78, p. 391-395

Research output: Contribution to journalArticleResearch

Biologische Kontrolle bodenbürtiger Pathogene in der Wüstenlandwirtschaft

Köberl, M., Müller, H., Ramadan, E. M., Smalla, K. & Berg, G., 15 Mar 2012.

Research output: Contribution to conference(Old data) Lecture or PresentationResearch

Endophytic biological control agents against soil-borne pathogens for desert agriculture

Köberl, M., Schmidt, R., Ramadan, E. M., Smalla, K. & Berg, G., 28 Mar 2012.

Research output: Contribution to conferencePosterResearch

Host-parasite interaction and microbiome response: effects of fungal infections on the bacterial community of the Alpine lichen Solorina crocea

Grube, M., Köberl, M., Lackner, S., Berg, C. & Berg, G., Nov 2012, In : FEMS microbiology ecology. 82, 2, p. 472-481

Research output: Contribution to journalArticleResearchpeer-review

Host-parasite interaction and microbiome response: effects of fungal infections on the bacterial community of the Alpine lichen Solorina crocea

Grube, M., Köberl, M., Lackner, S., Berg, C. & Berg, G., 12 Jan 2012.

Research output: Contribution to conference(Old data) Lecture or PresentationResearch

Implementation of pyrosequencing in biological control strategies for organic agriculture in Egypt

Schmidt, R., Köberl, M., Bauer, R., Ramadan, E. M., Müller, H. & Berg, G., 14 Nov 2012.

Research output: Contribution to conferencePosterResearch

Medical plant associated microbial communities and their potential for biocontrol in desert agriculture

Köberl, M., Schmidt, R., Ramadan, E. M., Müller, H., Smalla, K. & Berg, G., 14 Nov 2012.

Research output: Contribution to conferencePosterResearch

Microbial inoculants active under arid desert farming conditions in Egypt

Köberl, M., Schmidt, R., Ramadan, E. M., Cardinale, M., Müller, H., Smalla, K. & Berg, G., 16 Dec 2012.

Research output: Contribution to conference(Old data) Lecture or PresentationResearch

Next generation sequencing in biocontrol research: belowground communities in organic desert agro-ecosystems

Köberl, M., Schmidt, R., Ramadan, E. M., Bragina, A., Müller, H., Smalla, K. & Berg, G., 17 Sep 2012.

Research output: Contribution to conferencePosterResearch

Next generation sequencing in biocontrol research: belowground communities in organic desert agro-ecosystems

Köberl, M., Schmidt, R., Ramadan, E. M., Bragina, A., Müller, H., Smalla, K. & Berg, G., 17 Sep 2012.

Research output: Contribution to conference(Old data) Lecture or PresentationResearch

Pyrosequencing-based assessment of biological control strategies for organic agriculture in Egypt

Schmidt, R., Köberl, M., Bauer, R., Ramadan, E. M., Müller, H. & Berg, G., 17 Sep 2012.

Research output: Contribution to conferencePosterResearch

Sun and bacteria – a biocontrol strategy for sustainable agriculture in desert ecosystems

Köberl, M., Müller, H., Ramadan, E. M., Smalla, K. & Berg, G., 17 Mar 2012.

Research output: Contribution to conference(Old data) Lecture or PresentationResearch

2011

Biological control agents for medical plants: strategy for desert farming under organic conditions

Köberl, M. & Berg, G., 21 Jun 2011.

Research output: Contribution to conference(Old data) Lecture or PresentationResearch

Biologischer Pflanzenschutz – Biokontrolle: Mikroorganismen im biologischen Pflanzenschutz

Schmid, F., Köberl, M. & Berg, G., 23 Mar 2011.

Research output: Contribution to conference(Old data) Lecture or PresentationResearch