Jan Egger

Dr.rer.physiol. Priv.-Doz. Dr.rer.nat.

20132022
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Research Output 2014 2019

2014

Interactive-cut: Real-time feedback segmentation for translational research

Egger, J., Lüddemann, T., Schwarzenberg, R., Freisleben, B. & Nimsky, C., 2014, In : Computerized medical imaging and graphics. 38, 4, p. 285-295

Research output: Contribution to journalArticleResearchpeer-review

Novel Semiautomatic Real-time CT Segmentation Tool and Preliminary Clinical Evaluation on Thermally Induced Lesions in the Liver

Busse, H., Moche, M., Brandmaier, P., Gawlitza, M., Strocka, S., Kahn, T., Schmalstieg, D. & Egger, J., 2014.

Research output: Contribution to conferencePosterResearch

Refinement-Cut: User-Guided Segmentation Algorithm for Translational Science

Egger, J., 2014, In : Scientific reports. 4, 5164, p. 1-7

Research output: Contribution to journalArticleResearchpeer-review

Open Access
File
2015

Adaptive Scan Strategies for fetal MRI Imaging using Slice to Volume Techniques

Kainz, B., Malamateniou, C., Ferrazzi, G., Murgasova, M., Egger, J., Keraudren, K., Rutherford, M., Hajnal, J. & Rueckert, D., 2015, (Accepted/In press) IEEE International Symposium on Biomedical Imaging (ISBI): From Nano to Macro. .

Research output: Chapter in Book/Report/Conference proceedingConference contributionResearchpeer-review

Development of a surgical navigation system based on augmented reality using an optical see-through head-mounted display

Chen, X., Xu, L., Wang, Y., Wang, H., Wang, F., Zeng, X., Wang, Q. & Egger, J., 2015, In : Journal of biomedical informatics. 55, p. 124-131

Research output: Contribution to journalArticleResearchpeer-review

Global Illumination Rendering for High-Quality Volume Visualization in the Medical Domain

Voglreiter, P., Wallner, J., Reinbacher, K., Schwenzer-Zimmerer, K., Schmalstieg, D. & Egger, J., 2015, face 2 face - science meets art.

Research output: Chapter in Book/Report/Conference proceedingConference contributionResearchpeer-review

Global Illumination Rendering for High-Quality Volume Visualization in the Medical Domain

Voglreiter, P., Wallner, J., Reinbacher, K., Schwenzer-Zimmerer, K., Schmalstieg, D. & Egger, J., 2015.

Research output: Contribution to conferencePosterResearch

In-depth Multicenter Workflow Analysis of Liver Tumor Ablations for the Development of a Novel Computer-aided Software Tool

Egger, J., Voglreiter, P., Dokter, M., Hofmann, M., Busse, H., Seider, D., Brandmaier, P., Rautio, R., Zettel, G., Schmerböck, B., van Amerongen, M., Jenniskens, S., Kolesnik, M., Kainz, B., Sequeiros, R. B., Portugaller, H., Stiegler, P., Futterer, J., Schmalstieg, D. & Moche, M., 2015.

Research output: Contribution to conferencePosterResearch

In-depth Multicenter Workflow Analysis of Liver Tumor Ablations for the Development of a Novel Computer-aided Software Tool

Egger, J., Voglreiter, P., Dokter, M., Hofmann, M., Busse, H., Seider, D., Brandmaier, P., Rautio, R., Zettel, G., Schmerböck, B., van Amerongen, M., Jenniskens, S., Kolesnik, M., Kainz, B., Sequeiros, R. B., Portugaller, H., Stiegler, P., Futterer, J., Schmalstieg, D. & Moche, M., 2015.

Research output: Contribution to conference(Old data) Lecture or PresentationResearch

Interactive Volumetry Of Liver Ablation Zones

Egger, J., Busse, H., Brandmaier, P., Seider, D., Gawlitza, M., Strocka, S., Voglreiter, P., Dokter, M., Hofmann, M., Kainz, B., Hann, A., Chen, X., Alhonnoro, T., Pollari, M., Schmalstieg, D. & Moche, M., 2015, In : Scientific reports. 5, 15373, p. 1-18

Research output: Contribution to journalArticleResearchpeer-review

Open Access
File

Interaktive und skalierungsinvariante Segmentierung des Rektums/Sigmoid in intraoperativen MRT-Aufnahmen für die gynäkologische Brachytherapie

Lüddemann, T. & Egger, J., 2015, (Accepted/In press) Workshop Bildverarbeitung für die Medizin. Springer Verlag

Research output: Chapter in Book/Report/Conference proceedingConference contributionResearch

RFA-Cut: Semi-automatic Segmentation of Radiofrequency Ablation Zones with and without Needles via Optimal s-t-Cuts

Egger, J., Busse, H., Brandmaier, P., Seider, D., Gawlitza, M., Strocka, S., Voglreiter, P., Dokter, M., Hofmann, M., Kainz, B., Chen, X., Hann, A., Boechat de Almeida Germano, P., Yu, W., Freisleben, B., Alhonnoro, T., Pollari, M., Moche, M. & Schmalstieg, D., 2015, (Accepted/In press) Annual International Conference of the IEEE Engineering in Medicine and Biology Society. Institute of Electrical and Electronics Engineers

Research output: Chapter in Book/Report/Conference proceedingConference contributionResearchpeer-review

Semi-automatische Segmentierung von Schädigungszonen in post-interventionellen CT-Daten

Egger, J., Busse, H., Moche, M., Brandmaier, P., Seider, D., Gawlitza, M., Strocka, S., Garnov, N., Fuchs, J., Voigt, P., Dazinger, F., Voglreiter, P., Dokter, M., Hofmann, M., Hann, A., Freisleben, B., Kahn, T. & Schmalstieg, D., 2015, (Accepted/In press) Workshop Bildverarbeitung für die Medizin. Springer Verlag

Research output: Chapter in Book/Report/Conference proceedingConference contributionResearch

2016

AR (augmented reality)-Paradigmenwechsel im Therapiedesign

Reinbacher, K., Wallner, J., Egger, J., Voglreiter, P., Pau, M., Zrnc, T., Feichtinger, M. & Schwenzer-Zimmerer, K., 2016.

Research output: Contribution to conference(Old data) Lecture or PresentationResearch

A semi-automatic computer-aided method for surgical template design

Chen, X., Xu, L., Yang, Y. & Egger, J., 2016, In : Scientific reports. p. 1-18

Research output: Contribution to journalArticleResearchpeer-review

Open Access
File

Clinical Evaluation of Mandibular Bone Segmentation

Egger, J., Hochegger, K., Gall, M., Reinbacher, K., Schwenzer-Zimmerer, K., Wallner, J. & Schmalstieg, D., 1 Aug 2016, Proc. IEEE Engineering in Medicine and Biology Society (EMBC'16), Posters. Orlando, FL, USA: IEEE Computer Society

Research output: Chapter in Book/Report/Conference proceedingConference contributionResearchpeer-review

Computer-Aided Planning and Reconstruction of Cranial 3D Implants

Gall, M., Li, X., Chen, X., Schmalstieg, D. & Egger, J., 1 Aug 2016, Proc. IEEE Engineering in Medicine and Biology Society (EMBC'16). Orlando, FL, USA

Research output: Chapter in Book/Report/Conference proceedingConference contributionResearchpeer-review

Computer-Aided Planning of Cranial 3D Implants

Gall, M., Chen, X., Schmalstieg, D. & Egger, J., 1 Jun 2016, In : International Journal of Computer Assisted Radiology and Surgery. 11, Suppl 1, p. 187

Research output: Contribution to journalArticleResearchpeer-review

Computer-aided Reconstruction of Facial Defects

Gall, M., Wallner, J., Schwenzer-Zimmerer, K., Schmalstieg, D., Reinbacher, K. & Egger, J., 1 Aug 2016.

Research output: Contribution to conferencePosterResearchpeer-review

Development of a computer-aided design software for dental splint in orthognathic surgery

Chen, X., Li, X., Xu, L., Sun, Y., Politis, C. & Egger, J., 14 Dec 2016, In : Scientific reports. 6, p. 38867

Research output: Contribution to journalArticleResearchpeer-review

Orthognathic Surgery
Computer-Aided Design
Splints
Tooth
Software

Image-guided real-time-segmentation of the mandibular bone: Can a simple Segmentation approach provide a satisfying result for a practicable use?

Wallner, J., Reinbacher, K., Egger, J., Pau, M., Zemann, W., Zrnc, T., Schmalstieg, D. & Schwenzer-Zimmerer, K., 2016.

Research output: Contribution to conference(Old data) Lecture or PresentationResearch

Improvement in advanced pancreatic cancer survival with novel chemotherapeutic strategies - experience of a community based hospital

Hann, A., Bohle, W., Egger, J. & Zoller, W. G., Oct 2016, In : Zeitschrift für Gastroenterologie. 54, 10, p. 1138-1142 5 p.

Research output: Contribution to journalArticleResearchpeer-review

Community Hospital
Pancreatic Neoplasms
Survival
gemcitabine
Adenocarcinoma
Brachytherapy
Colon
Rectum
Neoplasms
Sigmoid Colon

Segmentierung medizinischer Bilddaten und bildgestützte intraoperative Navigation

Egger, J., Dec 2016, 304 p.

Research output: ThesisHabilitationResearch

Open Access
File
Navigation
Tumors
Seed
Brain
Medical image processing

US-Cut: interactive algorithm for rapid detection and segmentation of liver tumors in ultrasound acquisitions

Egger, J., Voglreiter, P., Hofmann, M., Chen, X., Zoller, W. G., Schmalstieg, D., Hann, A. & Dokter, M., 2016, Proc. SPIE. Vol. 9790. p. 97901C-97901C-6

Research output: Chapter in Book/Report/Conference proceedingConference contributionResearchpeer-review

2017

Algorithm guided outlining of 105 pancreatic cancer liver metastases in Ultrasound

Hann, A., Bettac, L., Haenle, M. M., Graeter, T., Berger, A. W., Dreyhaupt, J., Schmalstieg, D., Zoller, W. G. & Egger, J., 6 Oct 2017, In : Scientific reports. 7, 1, p. 12779

Research output: Contribution to journalArticleResearchpeer-review

Liver Neoplasms
Pancreatic Neoplasms
Neoplasm Metastasis
Liver

Algorithmic evaluation of lower jawbone segmentations

Egger, J., Hochegger, K., Gall, M., Chen, X., Reinbacher, K., Schwenzer-Zimmerer, K., Schmalstieg, D. & Wallner, J., 1 Feb 2017, Proc. SPIE Medical Imaging. Orlando, FL, USA

Research output: Chapter in Book/Report/Conference proceedingConference contributionResearchpeer-review

Augmented Reality (AR)-guided intraoperative Navigation

Egger, J., 2017.

Research output: Contribution to conferencePosterResearch

Automatic urinary bladder segmentation in CT images using deep learning

Gsaxner, C., 2017

Research output: ThesisMaster's ThesisResearch

A VR-based surgical simulation system using patient- specific physical computing model

Egger, J., 2017.

Research output: Contribution to conferencePosterResearchpeer-review

Computer-aided implant design for the restoration of cranial defects

Chen, X., Xu, L., Li, X. & Egger, J., 23 Jun 2017, In : Scientific reports. 7, 1, p. 4199

Research output: Contribution to journalArticleResearchpeer-review

Computer-Aided Design
Software
Efficiency

Computer-aided position planning of miniplates to treat facial bone defects

Egger, J., Wallner, J., Gall, M., Chen, X., Schwenzer-Zimmerer, K., Reinbacher, K. & Schmalstieg, D., 2017, In : PLoS ONE. 12, 8, p. e0182839

Research output: Contribution to journalArticleResearchpeer-review

Facial Bones
Bone
surgeons
planning
bones

Evaluation of an Interactive Segmentation Algorithm using Ultrasound Images of Pancreatic Cancer Liver Metastases

Egger, J., 2017.

Research output: Contribution to conferencePosterResearchpeer-review

Feasibility of alternating induction and maintenance chemotherapy in pancreatic cancer

Hann, A., Bohle, W., Egger, J. & Zoller, W., 31 Jan 2017, In : Scientific reports. 7, 7 p., 41549.

Research output: Contribution to journalArticleResearchpeer-review

Maintenance Chemotherapy
Induction Chemotherapy
Pancreatic Neoplasms
Adenocarcinoma
Therapeutics

HTC Vive MeVisLab integration via OpenVR for medical applications

Egger, J., Gall, M., Wallner, J., Boechat, P., Hann, A., Li, X., Chen, X. & Schmalstieg, D., 2017, In : PLoS ONE. 12, 3, p. e0173972

Research output: Contribution to journalArticleResearchpeer-review

Medical applications
Virtual reality
Libraries
medical equipment
Equipment and Supplies

In-depth Assessment of an Interactive Graph-based Approach for the Segmentation for Pancreatic Metastasis in Ultrasound Acquisitions of the Liver with two Specialists in Internal Medicine

Egger, J., Chen, X., Bettac, L., Haenle, M. M., Graeter, T., Zoller, W., Schmalstieg, D. & Hann, A., 2017.

Research output: Contribution to conferencePaperResearchpeer-review

Integration of the HTC Vive into the Medical Platform MeVisLab

Egger, J., Gall, M., Hann, A., Li, X., Chen, X., Schmalstieg, D., Boechat de Almeida Germano, P. & Wallner, J., 1 Feb 2017, Proc. SPIE Medical Imaging. Orlando, FL, USA

Research output: Chapter in Book/Report/Conference proceedingConference contributionResearchpeer-review

Integration of the HTC Vive into the Medical Platform MeVisLab

Egger, J., 2017.

Research output: Contribution to conferencePosterResearchpeer-review

Interactive algorithm for the measurement of pancreatic cancer liver metastases in ultrasound

Egger, J., 2017.

Research output: Contribution to conferencePosterResearchpeer-review

Interactive Outlining of Pancreatic Cancer Liver Metastases in Ultrasound Images

Egger, J., Schmalstieg, D., Chen, X., Zoller, W. G. & Hann, A., 18 Apr 2017, In : Scientific reports. 7, 1, p. 892

Research output: Contribution to journalArticleResearchpeer-review

Liver Neoplasms
Pancreatic Neoplasms
Neoplasm Metastasis
Liver
Costs and Cost Analysis

Interactive Planning of Miniplates

Gall, M., Reinbacher, K., Stanzel, J., Chen, X., Schwenzer-Zimmerer, K., Wallner, J., Schmalstieg, D. & Egger, J., 1 Feb 2017, Proc. SPIE Medical Imaging. Orlando, FL, USA

Research output: Chapter in Book/Report/Conference proceedingConference contributionResearchpeer-review

Interactive Planning of Miniplates

Egger, J., 2017.

Research output: Contribution to conferencePosterResearchpeer-review

Interactive reconstructions of cranial 3D implants under MeVisLab as an alternative to commercial planning software

Egger, J., Gall, M., Tax, A., Ücal, M., Zefferer, U., Li, X., von Campe, G., Schäfer, U., Schmalstieg, D. & Chen, X., 2017, In : PLoS ONE. 12, 3, p. e0172694

Research output: Contribution to journalArticleResearchpeer-review

prototypes
computer-aided design
Software
planning
Workflow

Interaktive Planung von Gesichtsimplantaten

Gall, M., Reinbacher, K., Schwenzer-Zimmerer, K., Schmalstieg, D., Egger, J. & Wallner, J., 1 Mar 2017, Proc. Bildverarbeitung fuer die Medizin (BVM). Heidelberg, Germany

Research output: Chapter in Book/Report/Conference proceedingConference contributionResearchpeer-review

Interaktive Planung von Gesichtsimplantaten

Egger, J., 2017.

Research output: Contribution to conferencePosterResearchpeer-review

Vertebral body segmentation with GrowCut: Initial experience, workflow and practical application

Egger, J., Nimsky, C. & Chen, X., 2017, In : SAGE open medicine. 5, p. 2050312117740984

Research output: Contribution to journalArticleResearchpeer-review

Workflow
Spine
Spinal Diseases
Osteoporotic Fractures
Magnetic Resonance Imaging
2018

Chemotherapeutic agents eligible for prior dosing in pancreatic cancer patients requiring hemodialysis: A systematic review

Hann, A., Nosalski, E., Hermann, P. C., Egger, J., Seufferlein, T. & Keller, F., 1 Aug 2018, In : Clinical Nephrology. 90, 2, p. 125-141 17 p.

Research output: Contribution to journalArticleResearchpeer-review

Pancreatic Neoplasms
Renal Dialysis
oxaliplatin
irinotecan
gemcitabine

Clinical evaluation of semi-automatic open-source algorithmic software segmentation of the mandibular bone: Practical feasibility and assessment of a new course of action

Wallner, J., Hochegger, K., Chen, X., Mischak, I., Reinbacher, K., Pau, M., Zrnc, T., Schwenzer-Zimmerer, K., Zemann, W., Schmalstieg, D. & Egger, J., 2018, In : PLoS ONE. 13, 5

Research output: Contribution to journalArticleResearchpeer-review

Open Access
Bone
Software
Visualization
bones
Personnel