Photo of Christian Baumgartner

Christian Baumgartner

Univ.-Prof. Dipl.-Ing. Dr.techn.

1976 …2022
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Research Output 1996 2019

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1997

Electron-Beam-Computertomographie (EBCT) des Herzen

Rienmüller, R., Kern, R., Baumgartner, C. & Hackel, B., 1997, In : Der Radiologe. 37, 5, p. 410-416

Research output: Contribution to journalArticleResearchpeer-review

Quantitative Bestimmung der linksventrikulären Myokardperfusion mittels EBCT

Rienmüller, R., Baumgartner, C., Kern, R., Harb, S., Aigner, R., Füger, G. & Weihs, W., 1997, In : Herz. 22, 2, p. 63-71

Research output: Contribution to journalArticleResearchpeer-review

1999

Application of pharmacokinetics to electron-beam tomography of the abdomen

Krause, W., Gröll, R., Kern, R., Baumgartner, C. & Rienmüller, R., 1999, In : Academic Radiology. 6, 8, p. 487-495

Research output: Contribution to journalArticleResearchpeer-review

2004

Supervised machine learning techniques for the classification of metabolic disorders in newborns

Baumgartner, C., Böhm, C., Baumgartner, D., Marini, G., Weinberger, K. M., Olgemöller, B., Liebl, B. & Roscher, A. A., 2004, In : Bioinformatics. 20, 17, p. 2985-2996

Research output: Contribution to journalArticleResearchpeer-review

2005

Diagnostic power of aortic elastic properties in young patients with Marfan-syndrome

Baumgartner, D., Baumgartner, C., Mátyás, G., Steinmann, B., Löffler-Ragg, J., Schermer, E., Schweigmann, U., Baldissera, I., Frischhut, B., Hess, J. & Hammerer, I., 2005, In : The journal of thoracic and cardiovascular surgery. 129, 4, p. 730-739

Research output: Contribution to journalArticleResearchpeer-review

Functional cluster analysis of CT perfusion maps: A new tool for diagnosis of acute stroke?

Baumgartner, C., Gautsch, K., Böhm, C. & Felber, S., 2005, In : Journal of digital imaging. 18, 3, p. 219-226

Research output: Contribution to journalArticleResearchpeer-review

Impaired elastic properties of the ascending aorta in newborns before and early after successful coarctation repair: Proof of a systemic vascular disease of the prestenotic arteries?

Vogt, M., Kühn, A., Baumgartner, D., Baumgartner, C., Busch, R., Kostolny, M. & Hess, J., 2005, In : Circulation. 111, 24, p. 3269-3273

Research output: Contribution to journalArticleResearchpeer-review

Marfan syndrome: A diagnostic challenge caused by phenotypic and genetic heterogeneity

Baumgartner, C., Mátyás, G., Steinmann, B. & Baumgartner, D., 2005, In : Methods of information in medicine. 44, 4, p. 487-497

Research output: Contribution to journalArticleResearchpeer-review

Modelling of classification rules on metabolic patterns including machine learning and expert knowledge

Baumgartner, C., Böhm, C. & Baumgartner, D., 2005, In : Journal of biomedical informatics. 38, 2, p. 89-98

Research output: Contribution to journalArticleResearchpeer-review

Reduced aortic elastic properties in a child with Takayasu arteritis: case report and literature review

Baumgartner, D., Sailer-Höck, M., Baumgartner, C., Trieb, T., Maurer, H., Schirmer, M., Zimmerhackl, B. & Stein, J. I., 2005, In : European journal of pediatrics. 164, 11, p. 685-690

Research output: Contribution to journalArticleResearchpeer-review

2006

A bioinformatics framework for genotype-phenotype correlation in humans with Marfan syndrome caused by FBN1 gene mutations

Baumgartner, C., Mátyás, G., Steinmann, B., Eberle, M., Stein, J. I. & Baumgartner, D., 2006, In : Journal of biomedical informatics. 39, 2, p. 171-183

Research output: Contribution to journalArticleResearchpeer-review

Biomarker discovery, disease classification and similarity query processing on high-throughput MS/MS data of inborn errors of metabolism

Baumgartner, C. & Baumgartner, D., 2006, In : Journal of biomolecular screening. 11, 1, p. 90-99

Research output: Contribution to journalArticleResearchpeer-review

Different patterns of aortic wall elasticity in patients with Marfan syndrome: A noninvasive follow up study

Baumgartner, D., Baumgartner, C., Schermer, E., Engl, G., Schweigmann, U., Mátyás, G., Steinmann, B. & Stein, J. I., 2006, In : The journal of thoracic and cardiovascular surgery. 132, 4, p. 811-819

Research output: Contribution to journalArticleResearchpeer-review

Enhancing instance-based classification with local density: A new algorithm for classifying unbalanced biomedical data

Plant, C., Böhm, C., Tilg, B. & Baumgartner, C., 2006, In : Bioinformatics. 22, 8, p. 981-988

Research output: Contribution to journalArticleResearchpeer-review

Systematic Analysis of Signaling Pathways using an Integrative Environment

Visvanathan, M., Breit, M., Pfeifer, B., Baumgartner, C., Modre-Osprian, R. & Tilg, B., 2006, In : Methods of information in medicine. 46, 3, p. 386-391

Research output: Contribution to journalArticleResearchpeer-review

2008

A Cellular Automation Framework for Infectious Disease Spread Simulation

Pfeifer, B., Kugler, K. G., Tejada, M. M., Baumgartner, C., Seger, M., Osl, M., Netzer, M., Handler, M., Dander, A., Wurz, M., Graber, A. & Tilg, B., 2008, In : The open medical informatics journal. 2, p. 70-81

Research output: Contribution to journalArticleResearchpeer-review

A new rule-based data mining algorithm for identifying metabolic markers in prostate cancer using tandem mass spectrometry

Osl, M., Dreiseitl, S., Pfeifer, B., Weinberger, K. M., Klocker, H., Bartsch, G., Schäfer, G., Tilg, B., Graber, A. & Baumgartner, C., 2008, In : Bioinformatics. 24, 24, p. 2908-2814

Research output: Contribution to journalArticleResearchpeer-review

Bridging data management and knowledge discovery in the life sciences

Kugler, K. G., Tejada, M. M., Baumgartner, C., Tilg, B., Graber, A. & Pfeifer, B., 2008, In : The open bioinformatics journal . 2, p. 28-36

Research output: Contribution to journalArticleResearchpeer-review

DMSP - Database for Modeling Signaling Pathways. Combining biological and mathematical modeling knowledge for pathways

Visvanathan, M., Breit, M., Pfeifer, B., Baumgartner, C., Modre-Osprian, R. & Tilg, B., 2008, In : Methods of information in medicine. 47, 2, p. 140-148

Research output: Contribution to journalArticleResearchpeer-review

Metabolite profiling of blood from individuals undergoing planned myocardial infarction reveals early markers of myocardial injury

Lewis, G. D., Wei, R., Liu, E., Yang, E., Shi, X., Martinovic, M., Farrell, L., Asnani, A., Cyrille, M., Ramanathan, A., Shaham, O., Berriz, G., Lowry, P. A., Palacios, I. F., Taşan, M., Roth, F. P., Min, J., Baumgartner, C., Keshishian, H., Addona, T. & 6 othersMootha, V. K., Rosenzweig, A., Carr, S. A., Fifer, M. A., Sabatine, M. S. & Gerszten, R. E., 2008, In : The journal of clinical investigation. 118, 10, p. 3503-3512

Research output: Contribution to journalArticleResearchpeer-review

SeMoP: A New Computational Strategy for the Unrestricted Search for Modified Peptides Using LC-MS/MS Data

Baumgartner, C., Rejtar, T., Kullolli, M., Akella, L. M. & Karger, B. L., 2008, In : Journal of proteome research. 7, 9, p. 4199-4208

Research output: Contribution to journalArticleResearchpeer-review

2009

A new ensemble based algorithm for identifying breath gas marker candidates in liver disease using ion molecule reaction mass spectrometry

Netzer, M., Millonig, G., Osl, M., Pfeifer, B., Praun, S., Villinger, J., Vogel, W. & Baumgartner, C., 2009, In : Bioinformatics. 25, 7, p. 941-947

Research output: Contribution to journalArticleResearchpeer-review

Demoting redundant features to improve the discriminatory ability in cancer data

Osl, M., Dreiseitl, S., Cerqueira, F. R., Netzer, M., Pfeifer, B. & Baumgartner, C., 2009, In : Journal of biomedical informatics. 42, 4, p. 721-725

Research output: Contribution to journalArticleResearchpeer-review

Early Surgery in Patients with Coarcation of the Aorta Does Not Improve Impaired Elastic Properties of the Ascending Aorta in Midterm Follow-Up: A Longitudinal Prospective Study

Kühn, A., Baumgartner, D., Baumgartner, C., Hörer, J., Schreiber, C., Hess, J. & Vogt, M., 2009, In : Pediatric cardiology. 30, p. 46-51

Research output: Contribution to journalArticleResearchpeer-review

Improving phosphopeptide/protein identification using a new data mining framework for MS/MS spectra preprocessing

Cerqueira, F. R., Morandell, S., Ascher, S., Mechtler, K., Huber, L., Pfeifer, B., Graber, A., Tilg, B. & Baumgartner, C., 2009, In : Kritischer Verlag! Journal of Proteomics and Bioinformatics. 2, 3, p. 150-165

Research output: Contribution to journalArticleResearch

Oncogenes and pathway identification using filter based approaches between various carcinoma types in lung

Visvanathan, M., Netzer, M., Seger, M., Adagarla, B. S., Baumgartner, C., Sittampalam, S. & Lushington, G. H., 2009, In : International journal of computational biology and drug design. 2, 3, p. 236-251

Research output: Contribution to journalArticleResearchpeer-review

On the combination of logistic regression and local probability estimates

Osl, M., Baumgartner, C., Tilg, B. & Dreiseitl, S., 2009, In : African Journal of Information and Communication Technology . 5, 2, p. 84-90

Research output: Contribution to journalArticleResearchpeer-review

2010

An epidemological modeling and data integration framework

Pfeifer, B., Wurz, M., Hanser, F., Seger, M., Netzer, M., Osl, M., Modre-Osprian, R., Schreier, G. & Baumgartner, C., 2010, In : Methods of information in medicine. 49, 3, p. 290-296

Research output: Contribution to journalArticleResearchpeer-review

A new data mining approach for profiling and categorizing kinetic patterns of metabolic biomarkers after myocardial injury

Baumgartner, C., Lewis, G. D., Netzer, M., Pfeifer, B. & Gerszten, R. E., 2010, In : Bioinformatics. 26, 14, p. 1745-1751

Research output: Contribution to journalArticleResearchpeer-review

Evaluation of Heuristics for Rule Ranking

Dreiseitl, S., Osl, M., Baumgartner, C. & Vinterbo, S., 2010, In : Artificial Intelligence in Medicine. 50, 3, p. 175-180

Research output: Contribution to journalArticleResearchpeer-review

MUDE: A new approach for optimizing sensitivity in the target-decoy search strategy for large-scale peptide/protein identification

Cerqueira, F. R., Graber, A., Schwikowski, B. & Baumgartner, C., 2010, In : Journal of proteome research. 9, 5, p. 2265-2277

Research output: Contribution to journalArticleResearchpeer-review

Non-invasive diagnosis of liver diseases by breath analysis using an optimized ion-molecule reaction-mass spectrometry approach: a pilot study

Millonig, G., Praun, S., Netzer, M., Baumgartner, C., Dornauer, A. P., Müller, S., Villinger, J. & Vogel, W., 2010, In : Biomarkers. 15, 4, p. 297-306

Research output: Contribution to journalArticleResearchpeer-review

2011

Alles bio( technisch)

Baumgartner, C., 15 May 2011, CliniCum, p. 30-31.

Research output: Contribution to specialist publicationArticleResearch

Bioinformatic-driven search for metabolic biomarkers in disease

Baumgartner, C., Osl, M., Netzer, M. & Baumgartner, D., 2011, In : Journal of clinical bioinformatics. 1, 2, p. 1-10

Research output: Contribution to journalArticleResearchpeer-review

Matrix-Assisted Laser Desorption-Ionization Imaging Mass Spectrometry for Direct Tissue Analysis

Pallua, J. D., Schäfer, G., Bittner, L. K., Pezzei, C., Huck-Pezzei, V., Schönbichler, S. A., Becker, M., Schneider, S., Meding, S., Rauser, S., Walch, A., Handler, M., Netzer, M., Osl, M., Seger, M., Pfeifer, B., Baumgartner, C., Lindner, H., Kremser, L., Sarb, B. & 4 othersKlocker, H., Bartsch, G., Bonn, G. K. & Huck, C. W., 2011, In : LC, GC North America. Spec. Iss., p. 21-28

Research output: Contribution to journalArticleResearchpeer-review

Profiling human response to physical exercise: A computational strategy for the identification and kinetic analysis of metabolic biomarkers

Netzer, M., Weinberger, K. M., Handler, M., Seger, M., Kugler, K. G., Graber, A. & Baumgartner, C., 2011, In : Journal of clinical bioinformatics. 1, 34, p. 1-6

Research output: Contribution to journalArticleResearchpeer-review

Single-beat noninvasive imaging of ventricular endocardial and epicardial activation in patients undergoing CRT

Berger, T., Pfeifer, B., Hanser, F., Hintringer, F., Fischer, G., Netzer, M., Trieb, T., Stühlinger, M., Dichtl, W., Baumgartner, C., Pachinger, O. & Seger, M., 2011, In : PLoS ONE. 6, e16255, p. 1-7

Research output: Contribution to journalArticleResearchpeer-review

2012

Achieving elongated lesions employing cardiac cryoablation: a preclinical evaluation study

Seger, M., Fischer, G., Handler, M., Stöger, M., Nowak, C. N., Hintringer, F., Klima, G. & Baumgartner, C., 2012, In : Cryobiology. 65, p. 145-150

Research output: Contribution to journalArticleResearchpeer-review

A network-based feature selection approach to identify metabolic signatures in disease

Netzer, M., Kugler, K. G., Müller, L. A. J., Weinberger, K. M., Baumgartner, C. & Dehmer, M., 2012, In : Journal of theoretical biology. 310, p. 216-222

Research output: Contribution to journalArticleResearchpeer-review

Effects of pooling samples on the performance of classifiers: A comparative study

Kusonmano, K., Netzer, M., Baumgartner, C., Dehmer, M., Liedl, K. R. & Graber, A., 2012, In : The Scientific World Journal . p. 278352-278352

Research output: Contribution to journalArticleResearchpeer-review

Letter to the Editor with respect to the article by Tormos et al.

Fischer, G., Handler, M., Kienast, R. & Baumgartner, C., 2012, In : Medical engineering & physics. 34, p. 795-795

Research output: Contribution to journalArticleResearchpeer-review

MUMAL: Multivariate analysis in shotgun proteomics using machine learning techniques

Cerqueira, F. R., Ferreira, R. S., Oliveira, A. P., Gomes, A. P., Ramos, H. J. O., Graber, A. & Baumgartner, C., 2012, In : BMC Genomics . 13, Suppl 5, p. S4-S4

Research output: Contribution to journalArticleResearchpeer-review

OmicsMiner: A biological data mining framework

Netzer, M., Lee, I. H., Handler, M., Manickam, V. A., Baumgartner, C., Lushington, G. H., Visvanathan, M. & Zhou, Z., 2012, In : Kritischer Verlag! Journal of Data Mining in Genomics & Proteomics . 3, 2, p. 115-115

Research output: Contribution to journalArticleResearch

2013

Computer simulation of cardiac cryoablation: comparison with in-vivo data

Handler, M., Fischer, G., Seger, M., Kienast, R., Nowak, C. N., Pehböck, D., Hintringer, F. & Baumgartner, C., 2013, In : Medical engineering & physics. 35, 12, p. 1754-1761

Research output: Contribution to journalArticleResearchpeer-review

Discussion of “Time-frequency techniques in biomedical signal analysis: A tutorial review of similarities and differences"

Baumgartner, C., Blinowska, K. J., Cichocki, A., Dickhaus, H., Durka, P. J., McClintock, P. V. E., Pfurtscheller, G., Stefanovska, A. & Tong, S., 2013, In : Methods of information in medicine. 52, 4, p. 297-307

Research output: Contribution to journalArticleResearchpeer-review

Genetic network and gene set enrichment analysis to identify biomarkers related to cigarette smoking and lung cancer

Fang, X., Netzer, M., Baumgartner, C., Bai, C. & Wang, X. D., 2013, In : Cancer Treatment Reviews. 39, 1, p. 77-88

Research output: Contribution to journalArticleResearchpeer-review

MALDI-MS Tissue Imaging Identification of Biliverdin Reductase B Overexpression in Prostate Cancer

Pallua, J. D., Schäfer, G., Seifarth, C., Becker, M., Schneider, S., Meding, S., Rauser, S., Walch, A., Handler, M., Netzer, M., Popovscaia, M., Osl, M., Baumgartner, C., Lindner, H., Kremser, L., Sarb, B., Bartsch, G., Huck, C. W., Bonn, G. K. & Klocker, H., 2013, In : Journal of proteomics. 91, p. 500-514

Research output: Contribution to journalArticleResearchpeer-review

Medizintechnik: Herausforderung und Grenzen

Baumgartner, C., 15 Jan 2013, Das Medizin-Produkt, p. 38-38.

Research output: Contribution to specialist publicationArticleResearch

2014

Alterations of field potentials in isotropic cardiomyocyte cell layers induced by multiple endogenous pacemakers under normal and hypothermal conditions

Kienast, R., Stöger, M., Handler, M., Hanser, F. & Baumgartner, C., 2014, In : American Journal of Physiology / Heart and Circulatory Physiology. 307, 7, p. H1013-H1023

Research output: Contribution to journalArticleResearchpeer-review

2015

Evaluation of an Integrated Telemonitoring Surveillance System in Patients with Coronary Heart Disease

Ammenwerth, E., Woess, S., Baumgartner, C., Fetz, B., Von der Heidt, A., Kastner, P., Modre-Osprian, R., Welte, S. & Poelzl, G., 2015, In : Methods of information in medicine. 54, 5, p. 388-397

Research output: Contribution to journalArticleResearchpeer-review