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Research Output 1979 2019

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Article
1998

Transcriptional Profiling on all Open Reading Frames of Saccharomyces cerevisiae

Hauser, N. C., Vingron, M., Scheideler, M., Krems, B., Hellmuth, K., Entian, K. D. & Hoheisel, J. D., 1998, In : Yeast. 14, p. 1209-1221

Research output: Contribution to journalArticleResearchpeer-review

2000

DNA microchips: transcriptional profiling and beyond

Beier, M., Matysiak, S., Hauser, N. C., Scheideler, M., Würtz, S., Fellenberg, K., Vingron, M. & Hoheisel, J. D., 2000, In : Chimia. p. 29-30

Research output: Contribution to journalArticleResearchpeer-review

Processing and Quality Control of DNA Array Hybridization Data

Beissbarth, T., Fellenberg, K., Brors, B., Arribas-Prat, R., Hauser, N. C., Scheideler, M., Hoheisel, J. D., Schütz, G., Poustka, A. & Vingron, M., 2000, In : Bioinformatics. 16, 11, p. 1014-1022

Research output: Contribution to journalArticleResearchpeer-review

Open Access
File

The role of lipoprotein lipase in adipose tissue development and metabolism

Zechner, R., Strauss, J. G., Frank, S., Wagner, E., Hofmann, W., Kratky, D., Hiden, M. & Levak-Frank, S., 2000, In : International journal of obesity and related metabolic disorders. 24, Suppl. 4, p. S53-S56

Research output: Contribution to journalArticleResearchpeer-review

2001

Adenovirus-mediated apo(a)-antisense-RNA expression efficiently inhibits apo(a) synthesis in vitro and in vivo

Frank, S., Gauster, M., Strauss, J. G., Hrenzjak, A. & Kostner, GM., 2001, In : Gene therapy. 8, 6, p. 425-30

Research output: Contribution to journalArticleResearchpeer-review

Adenovirus-mediated rescue of lipoprotein lipase-deficient mice. Lipolysis of triglyceride-rich lipoproteins is essential for high density lipoprotein maturation in mice

Strauss, J. G., Frank, S., Kratky, D., Haemmerle, G., Hrenzjak, A., Knipping, G., Eckardstein, von, A., Kostner, GM. & Zechner, R., 2001, In : The Journal of Biological Chemistry. 276, 39, p. 36083-36090

Research output: Contribution to journalArticleResearchpeer-review

Differential Gene Expression Profile of Glucocorticoids, Testosterone, and Dehydroepiandrosterone on Human Immune Cells.

Maurer, M., Trajanoski, Z., Frey, G., Hiroi, N., Galon, N., Chrousos, GP., Gold, P., Scherbaum, WA. & Bornstein, SR., 2001, In : Hormone and metabolic research. 33, 12, p. 691-695

Research output: Contribution to journalArticleResearchpeer-review

Source localization of induced cortical oscillations during tactile finger stimulation.

Schweitzer, G., Edlinger, G., Krausz, G., Neuper, C., Bammer, R., Stollberger, R. & Pfurtscheller, G., 2001, In : Biomedical Engineering / Biomedizinische Technik. 46, 1-2, p. 24-28

Research output: Contribution to journalArticleResearchpeer-review

Tissue-specific activity of lipoprotein lipase in skeletal muscle regulates the expression of uncoupling protein 3 in transgenic mouse models

Kratky, D., Strauss, J. G. & Zechner, R., 2001, In : Biochemical Journal. 355, 3, p. 647-52

Research output: Contribution to journalArticleResearchpeer-review

2002

Clinical ECG mapping and imaging of cardiac electrical excitation

Tilg, B., Hanser, F., Modre-Osprian, R., Fischer, G., Messnarz, B., Berger, T., Hintringer, F., Pachinger, O. & Roithinger, F. X., 2002, In : Journal of electrocardiology. 35, 4,Suppl.1, p. 81-87

Research output: Contribution to journalArticleResearchpeer-review

DNA-Microarray Analyses: Benefits, Promises and Problems

Scheideler, M. & Hoheisel, J. D., 2002, In : Screening. 5, p. 22-25

Research output: Contribution to journalArticleResearch

Open Access
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EEG- versus EMG-Steuerung einer Handorthese bei einem Patienten mit C5/C6-Läsion

Pfurtscheller, G., Müller-Putz, G., Neuper, C. & Korisek, G., 2002, In : European journal of trauma. E-Suppl., 1, p. 126-130

Research output: Contribution to journalArticleResearchpeer-review

Endothelial cell-derived lipase mediates uptake and binding of high-density lipoprotein (HDL) particles and the selective uptake of HDL-associated cholesterol esters independent of its enzymic activity

Strauss, J. G., Zimmermann, R., Hrenzjak, A., Zhou, Y., Kratky, D., Levak-Frank, S., Kostner, GM., Zechner, R. & Frank, S., 2002, In : Biochemical Journal. 368, 1, p. 69-79

Research output: Contribution to journalArticleResearchpeer-review

Eye Movements in solving letter series completion problems

Wriessnegger, S., Janzen, G. & Albert, D., 2002, In : Psychologische Beiträge. 44, 4, p. 512-520

Research output: Contribution to journalArticleResearchpeer-review

Genesis:Cluster analysis of microarray data

Sturn, A., Quackenbush, J. & Trajanoski, Z., 2002, (Submitted) In : Bioinformatics.

Research output: Contribution to journalArticleResearchpeer-review

Hormone-sensitive lipase deficiency in mice changes the plasma lipid profile by affecting the tissue-specific expression pattern of lipoprotein lipase in adipose tissue and muscle

Haemmerle, G., Zimmermann, R., Strauss, J. G., Kratky, D., Riederer, M., Knipping, G. & Zechner, R., 2002, In : The Journal of Biological Chemistry. 277, 15, p. 12946-52

Research output: Contribution to journalArticleResearchpeer-review

Information management systems for pharmacogenomics

Thallinger, G., Trajanoski, S., Stocker, G. & Trajanoski, Z., 2002, In : Pharmacogenomics. 3, p. 651-667

Research output: Contribution to journalArticleResearchpeer-review

Model-based imaging of cardiac electrical excitation in humans

Tilg, B., Fischer, G., Modre, R., Hanser, F., Messnarz, B., Schocke, M., Kremser, C., Berger, T., Hintringer, F. & Roithinger, F. X., 2002, In : IEEE transactions on medical imaging. 21, 9, p. 1031-1039

Research output: Contribution to journalArticleResearchpeer-review

Monitoring the Switch from Housekeeping to Pathogen Defense Metabolism in Arabidopsis thaliana Using cDNA Arrays

Scheideler, M., Schlaich, N., Fellenberg, K., Beissbarth, T., Hauser, N. C., Vingron, M., Slusarenko, A. J. & Hoheisel, J. D., 2002, In : The Journal of Biological Chemistry. 277, 12;March 22, p. 10255-10561

Research output: Contribution to journalArticleResearchpeer-review

Open Access
File

On Modeling the Wilson Terminal in the Boundary and Finite Element Method

Fischer, G., Tilg, B., Modre-Osprian, R., Hanser, F., Messnarz, B. & Wach, P., 2002, In : IEEE transactions on biomedical engineering. p. 217-224

Research output: Contribution to journalArticleResearchpeer-review

YPL.db: the yeast protein localization database

Habeler, G., Natter, K., Thallinger, G., Crawford, ME., Kohlwein, S-D. & Trajanoski, Z., 2002, In : Nucleic acids research. 30, 1, p. 80-83

Research output: Contribution to journalArticleResearchpeer-review

2003

Analyses de microréseaux d´ADN: Avantages, Promesses et Problèmes

Scheideler, M. & Hoheisel, JD., 2003, In : Bioforum France. 2, 1, p. 2-5

Research output: Contribution to journalArticleResearch

Assessment of transcapillary glucose exchange in human skeletal muscle and adipose tissue

Regittnig, W., Ellmerer, M., Fauler, G., Sendlhofer, G., Trajanoski, Z., Leis, H-J., Schaupp, L. A., Wach, P. & Pieber, T. R., 2003, In : American Journal of Physiology / Endocrinology and Metabolism. p. E241-E251

Research output: Contribution to journalArticleResearchpeer-review

Atrial noninvasive activation mapping of paced rhythm data

Modre, R., Tilg, B., Fischer, G., Hanser, F., Messnarz, B., Seger, M., Schocke, M., Berger, T., Hintringer, F. & Roithinger, F. X., 2003, In : Journal of cardiovascular electrophysiology. 14, 7, p. 712-719

Research output: Contribution to journalArticleResearchpeer-review

Client-Server environment for high-performance gene expression data analysis

Sturn, A., Mlecnik, B., Pieler, R., Rainer, J., Truskaller, T. & Trajanoski, Z., 2003, In : Bioinformatics. p. 772-773

Research output: Contribution to journalArticleResearchpeer-review

Decreased fatty acid esterification compensates for the reduced lipolytic activity in hormone-sensitive lipase-deficient white adipose tissue.

Zimmermann, R., Haemmerle, G., Wagner, EM., Strauss, J. G., Kratky, D. & Zechner, R., 2003, In : Journal of lipid research. 44, 11, p. 2089-99

Research output: Contribution to journalArticleResearchpeer-review

Electrocardiographic imaging of atrial and ventricular electrical activation

Tilg, B., Fischer, G., Modre, R., Hanser, F., Messnarz, B. & Roithinger, F. X., 2003, In : Medical image analysis. 7, 3, p. 391-398

Research output: Contribution to journalArticleResearchpeer-review

Fatty acids liberated from high-density lipoprotein phospholipids by endothelial-derived lipase are incorporated into lipids in HepG2 cells

Strauss, J. G., Hayn, M., Zechner, R., Levak-Frank, S. & Frank, S., 2003, In : Biochemical Journal. 371, 3, p. 981-988

Research output: Contribution to journalArticleResearchpeer-review

Java editor for biological pathways

Trost, E., Hackl, H., Maurer, M. & Trajanoski, Z., 2003, In : Bioinformatics. 19, 6, p. 786-787

Research output: Contribution to journalArticleResearchpeer-review

Liver tumor development. c-Jun antagonizes the proapoptotic activity of p53.

Zenz, R., 2003, In : Cell. p. 181-92

Research output: Contribution to journalArticleResearchpeer-review

New trends in bioinformatcis: from genome sequence to personalized medicine

Molidor, R., Sturn, A., Maurer, M. & Trajanoski, Z., 2003, In : Experimental gerontology. 38, 10, p. 1031-1036

Research output: Contribution to journalArticleResearchpeer-review

TM4: A Free, Open-Source System for Microarray Data Management and Analysis

Saeed, A. I., Sharov, V., White, J., Li, J., Liang, W., Bhagabati, N., Braisted, J., Klapa, M., Currier, T., Thiagarajan, M., Sturn, A., Snuffin, M., Rezantsev, A., Popov, D., Ryltsov, A., Kostukovich, E., Borisovsky, I., Liu, Z., Vinsavich, A., Trush, V. & 1 othersQuackenbush, J., 2003, In : BioTechniques. 34, 2, p. 374-378

Research output: Contribution to journalArticleResearchpeer-review

2004

A comparison of noninvasive reconstruction of epicardial versus transmembrane potentials in consideration of the null-space

Messnarz, B., Seger, M., Fischer, G., Modre, R., Hanser, F. & Tilg, B., 2004, In : IEEE transactions on biomedical engineering. 51, p. 1-9

Research output: Contribution to journalArticleResearchpeer-review

Analysis of DNA Microarray Data

Hackl, H., Sanchez Cabo, F., Sturn, A., Wolkenhauer, O. & Trajanoski, Z., 2004, In : Current topics in medicinal chemistry. 4, p. 1355-1368

Research output: Contribution to journalArticleResearchpeer-review

A new spatiotemporal regularization approach for reconstruction of cardiac transmembrane potential patterns

Messnarz, B., Tilg, B., Modre, R., Fischer, G. & Hanser, F., 2004, In : IEEE transactions on biomedical engineering. 51, 2, p. 273-281

Research output: Contribution to journalArticleResearchpeer-review

ArrayNorm: comprehensive normalization and analysis of microarray data.

Pieler, R., Sanchez Cabo, F., Hackl, H., Thallinger, G. & Trajanoski, Z., 2004, In : Bioinformatics. 20, 12, p. 1971-1973

Research output: Contribution to journalArticleResearchpeer-review

ClusterControl: a web interface for distributing and monitoring bioinformatics applications on Linux cluster

Stocker, G., Rieder, D. & Trajanoski, Z., 2004, In : Bioinformatics. 20, 5, p. 805-807

Research output: Contribution to journalArticleResearchpeer-review

Generic features of tertiary chromatin structure as detected in natural chromosomes.

Müller, W. G., Rieder, D., Kreth, G., Cremer, C., Trajanoski, Z. & McNally, J. G., 2004, In : Molecular and cellular biology. 24, 21, p. 9359-70

Research output: Contribution to journalArticleResearchpeer-review

GOLD.db: genomics of lipid-associated disorders database

Hackl, H., Maurer, M., Mlecnik, B., Hartler, J., Stocker, G., Miranda Saavedra, D. & Trajanoski, Z., 2004, In : BMC Genomics . 5, 1, p. 93-93

Research output: Contribution to journalArticleResearchpeer-review

2005

A fully Bayesian model to cluster gene expression profiles

Vogl, C., Sanchez Cabo, F., Stocker, G., Hubbard, S., Wolkenauer, O. & Trajanoski, Z., 2005, In : Bioinformatics. 21, p. II130-II136

Research output: Contribution to journalArticleResearchpeer-review

A quantization method based on threshold optimization for microarrray short time series

Di Camillo, B., Sanchez Cabo, F., Toffolo, G., Nair, SK., Trajanoski, Z. & Cobelli, C., 2005, In : BMC Bioinformatics . 6, Suppl.4, p. 11-11

Research output: Contribution to journalArticleResearchpeer-review

EEG-based asynchronous BCI controls functional electrical stimulation in a tetraplegic patient

Pfurtscheller, G., Müller-Putz, G., Pfurtscheller, J. & Rupp, R., 2005, In : EURASIP journal on applied signal processing. 19, p. 3152-3155

Research output: Contribution to journalArticleResearchpeer-review

Effector memory Tcells, ealry metastasis, and survival cancer

Pages, F., Berger, A., Camus, M., Sanchez Cabo, F., Costes, A., Molidor, R., Mlecnik, B., Kirilovsky, A., Nilsson, M., Damotte, D., Meatchi, T., Bruneval, P., Cugnenenc, PH., Trajanoski, Z., Fridman, WH. & Galon, J., 2005, (Submitted) In : The New England journal of medicine.

Research output: Contribution to journalArticleResearchpeer-review

Endothelial lipase provides an alternative pathway for FFA uptake in lipoprotein lipase-deficient mouse adipose tissue

Kratky, D., Zimmermann, R., Wagner, E. M., Strauss, J. G., Jin, W., Kostner, G. M., Haemmerle, G., Rader, DJ. & Zechner, R., 2005, In : The journal of clinical investigation. 115, 1, p. 161-167

Research output: Contribution to journalArticleResearchpeer-review

Global gene expression profiling reveals widespread yet distinctive translational responses to different eukaryotic translation initiation factor 2B-targeting stress pathways

Smirnova, JB., Sanchez Cabo, F., Selley, JN., Carroll, K., Eddy, AA., McCarthy, JEG., Hubbard, SJ., Pavitt, GD. & Ashe, M., 2005, In : Molecular and cellular biology. 25, p. 9340-9349

Research output: Contribution to journalArticleResearchpeer-review

Grape-seed derived procyanidins interfere with adipogenesis of 3T3-L1 cells at the onset of differentiation

Pinent-Armengol, M., Blade, M. C., Salvado, M. J., Arola, L., Hackl, H., Quackenbush, J., Trajanoski, Z. & Ardevol, A., 2005, In : International journal of obesity and related metabolic disorders. 29, 8, p. 934-941

Research output: Contribution to journalArticleResearchpeer-review

Lipolysis: pathway under construction

Zechner, R., Strauss, J. G., Haemmerle, G., Lass, A. & Zimmermann, R., 2005, In : Current opinion in lipidology. 16, 3, p. 333-340

Research output: Contribution to journalArticleResearchpeer-review

MARS: Microarray analysis, retrieval, and storage system

Maurer, M., Molidor, R., Sturn, A., Hartler, J., Hackl, H., Stocker, G., Prokesch, A., Scheideler, M. & Trajanoski, Z., 2005, In : BMC Bioinformatics . 6, 101, p. 1-12

Research output: Contribution to journalArticleResearchpeer-review

Open Access
File

Molecular processes during fat cell development revealed by gene expression profiling and functional annotation

Hackl, H., Burkard, T., Sturn, A., Rubio, R., Schleiffer, A., Tian, S., Quackenbush, J., Eisenhaber, F. & Trajanoski, Z., 2005, In : Genome biology. p. R108-R108

Research output: Contribution to journalArticleResearchpeer-review

Ovarian Cancer Identification Based on Dimensionality Reduction for High-Throughput Mass Spectrometry Data

Yu, JS., Ongarello, S., Fiedler, R., Chen, RW., Toffolo, G., Trajanoski, Z. & Cobelli, C., 2005, In : Bioinformatics. p. 2200-2209

Research output: Contribution to journalArticleResearchpeer-review